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1.
Cells ; 12(23)2023 11 29.
Artículo en Inglés | MEDLINE | ID: mdl-38067155

RESUMEN

The anterior lens epithelium has the ability to differentiate into lens fibres throughout its life. The present study aims to identify and functionally characterize the adult stem cells in the human lens epithelium. Whole mounts of lens epithelium from donor eyes (normal/cataract) were immunostained for SOX2, gap junction protein alpha 1 (GJA1), PAX6, α, ß and γ-crystallins, followed by a confocal analysis. The functional property of adult stem cells was analysed by their sphere forming ability using cultured lens epithelial cells from different zones. Based on marker expression, the lens epithelium was divided into four zones: the central zone, characterized by a small population of PAX6+, GJA1-, ß-crystallin- and γ-crystallin- cells; the germinative zone, characterized by PAX6+, GJA1+, ß-crystallin- and γ-crystallin-; the transitional zone, characterized by PAX6+, GJA1+, ß-crystallin+ and γ-crystallin-; and the equatorial zone, characterized by PAX6+/-, GJA1+, ß-crystallin+, and γ-crystallin+ cells. The putative lens epithelial stem cells identified as SOX2+ and GJA1 membrane expression negative cells were located only in the central zone (1.89 ± 0.84%). Compared to the other zones, a significant percentage of spheres were identified in the central zone (1.68 ± 1.04%), consistent with the location of the putative adult lens epithelial stem cells. In the cataractous lens, an absence of SOX2 expression and a significant reduction in sphere forming ability (0.33 ± 0.11%) were observed in the central zone. The above findings confirmed the presence of putative stem cells in the central zone of the adult human lens epithelium and indicated their probable association with cataract development.


Asunto(s)
Catarata , gamma-Cristalinas , Adulto , Humanos , gamma-Cristalinas/metabolismo , Células Epiteliales/metabolismo , Catarata/metabolismo , beta-Cristalinas/metabolismo , Células Madre/metabolismo
2.
Int J Mol Sci ; 24(21)2023 Oct 29.
Artículo en Inglés | MEDLINE | ID: mdl-37958704

RESUMEN

Highly concentrated lens proteins, mostly ß- and γ-crystallin, are responsible for maintaining the structure and refractivity of the eye lens. However, with aging and cataract formation, ß- and γ-crystallin are associated with the lens membrane or other lens proteins forming high-molecular-weight proteins, which further associate with the lens membrane, leading to light scattering and cataract development. The mechanism by which ß- and γ-crystallin are associated with the lens membrane is unknown. This work aims to study the interaction of ß- and γ-crystallin with the phospholipid membrane with and without cholesterol (Chol) with the overall goal of understanding the role of phospholipid and Chol in ß- and γ-crystallin association with the membrane. Small unilamellar vesicles made of Chol/1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (Chol/POPC) membranes with varying Chol content were prepared using the rapid solvent exchange method followed by probe tip sonication and then dispensed on freshly cleaved mica disk to prepare a supported lipid membrane. The ßL- and γ-crystallin from the cortex of the bovine lens was used to investigate the time-dependent association of ßL- and γ-crystallin with the membrane by obtaining the topographical images using atomic force microscopy. Our study showed that ßL-crystallin formed semi-transmembrane defects, whereas γ-crystallin formed transmembrane defects on the phospholipid membrane. The size of semi-transmembrane defects increases significantly with incubation time when ßL-crystallin interacts with the membrane. In contrast, no significant increase in transmembrane defect size was observed in the case of γ-crystallin. Our result shows that Chol inhibits the formation of membrane defects when ßL- and γ-crystallin interact with the Chol/POPC membrane, where the degree of inhibition depends upon the amount of Chol content in the membrane. At a Chol/POPC mixing ratio of 0.3, membrane defects were observed when both ßL- and γ-crystallin interacted with the membrane. However, at a Chol/POPC mixing ratio of 1, no association of γ-crystallin with the membrane was observed, which resulted in a defect-free membrane, and the severity of the membrane defect was decreased when ßL-crystallin interacted with the membrane. The semi-transmembrane or transmembrane defects formed by the interaction of ßL- and γ-crystallin on phospholipid membrane might be responsible for light scattering and cataract formation. However, Chol suppressed the formation of such defects in the membrane, likely maintaining lens membrane homeostasis and protecting against cataract formation.


Asunto(s)
Catarata , Cristalino , gamma-Cristalinas , Animales , Bovinos , Fosfolípidos/metabolismo , gamma-Cristalinas/metabolismo , Microscopía de Fuerza Atómica , Cristalino/metabolismo , Catarata/metabolismo
3.
J Comput Chem ; 44(19): 1658-1666, 2023 07 15.
Artículo en Inglés | MEDLINE | ID: mdl-37093714

RESUMEN

The molecular basis underlying the rich phase behavior of globular proteins remains poorly understood. We use atomistic multiscale molecular simulations to model the solution-state conformational dynamics and interprotein interactions of γ D-crystallin and its P23T-R36S mutant, which drastically limits the protein solubility, at both infinite dilution and at a concentration where the mutant fluid phase and crystalline phase coexist. We find that while the mutant conserves the protein fold, changes to the surface exposure of residues in the neighborhood of residue-36 enhance protein-protein interactions and develop specific protein-protein contacts found in the protein crystal lattice.


Asunto(s)
Catarata , gamma-Cristalinas , Humanos , gamma-Cristalinas/química , gamma-Cristalinas/metabolismo , Solubilidad , Catarata/metabolismo
4.
Macromol Biosci ; 23(5): e2200526, 2023 05.
Artículo en Inglés | MEDLINE | ID: mdl-36808690

RESUMEN

In the human eye lenses, the crystallin proteins facilitate transparency, light refraction, as well as UV light protection. A deregulated balanced interplay between α-, ß-, and γ-crystallin can cause cataract. γD-crystallin (hγD) is involved in the energy dissipation of absorbed UV light by energy transfer between aromatic side chains. Early UV-B induced damage of hγD with molecular resolution is studied by solution NMR and fluorescence spectroscopy. hγD modifications are restricted to Tyr 17 and Tyr 29 in the N-terminal domain, where a local unfolding of the hydrophobic core is observed. None of the tryptophan residues assisting fluorescence energy transfer is modified and hγD is remained soluble over month. Investigating isotope-labeled hγD surrounded by eye lens extracts from cataract patients reveals very week interactions of solvent-exposed side chains in the C-terminal hγD domain and some remaining photoprotective properties of the extracts. Hereditary E107A hγD found in the eye lens core of infants developing cataract shows under the here used conditions a thermodynamic stability comparable to the wild type but an increased sensitivity toward UV-B irradiation.


Asunto(s)
Catarata , Cristalino , gamma-Cristalinas , Humanos , gamma-Cristalinas/química , gamma-Cristalinas/metabolismo , Rayos Ultravioleta , Pliegue de Proteína , Cristalino/metabolismo , Catarata/metabolismo
5.
J Inorg Biochem ; 242: 112159, 2023 05.
Artículo en Inglés | MEDLINE | ID: mdl-36827733

RESUMEN

Loss of metal homeostasis may be involved in several age-related diseases, such as cataracts. Cataracts are caused by the aggregation of lens proteins into light-scattering high molecular weight complexes that impair vision. Environmental exposure to heavy metals, such as mercury, is a risk factor for cataract development. Indeed, mercury ions induce the non-amyloid aggregation of human γC- and γS crystallins, while human γD-crystallin is not sensitive to this metal. Using Differential Scanning Calorimetry (DSC), we evaluate the impact of mercury ions on the kinetic stability of the three most abundant human γ-crystallins. The metal/crystallin interactions were characterized using Isothermal Titration Calorimetry (ITC). Human γD-crystallins exhibited kinetic stabilization due to the presence of mercury ions, despite its thermal stability being decreased. In contrast, human γC- and γS-crystallins are both, thermally and kinetically destabilized by this metal, consistent with their sensitivity to mercury-induced aggregation. The interaction of human γ-crystallins with mercury ions is highly exothermic and complex, since the protein interacts with the metal at more than three sites. The isolated domains of human γ-D and its variant with the H22Q mutation were also studied, revealing the importance of these regions in the mercury-induced stabilization by a direct metal-protein interaction.


Asunto(s)
Catarata , Mercurio , gamma-Cristalinas , Humanos , gamma-Cristalinas/química , gamma-Cristalinas/genética , gamma-Cristalinas/metabolismo , Catarata/genética , Catarata/metabolismo , Mutación , Iones
6.
J Biol Chem ; 298(10): 102417, 2022 10.
Artículo en Inglés | MEDLINE | ID: mdl-36037967

RESUMEN

Γ-Crystallins play a major role in age-related lens transparency. Their destabilization by mutations and physical chemical insults are associated with cataract formation. Therefore, drugs that increase their stability should have anticataract properties. To this end, we screened 2560 Federal Drug Agency-approved drugs and natural compounds for their ability to suppress or worsen H2O2 and/or heat-mediated aggregation of bovine γ-crystallins. The top two drugs, closantel (C), an antihelminthic drug, and gambogic acid (G), a xanthonoid, attenuated thermal-induced protein unfolding and aggregation as shown by turbidimetry fluorescence spectroscopy dynamic light scattering and electron microscopy of human or mouse recombinant crystallins. Furthermore, binding studies using fluorescence inhibition and hydrophobic pocket-binding molecule bis-8-anilino-1-naphthalene sulfonic acid revealed static binding of C and G to hydrophobic sites with medium-to-low affinity. Molecular docking to HγD and other γ-crystallins revealed two binding sites, one in the "NC pocket" (residues 50-150) of HγD and one spanning the "NC tail" (residues 56-61 to 168-174 in the C-terminal domain). Multiple binding sites overlap with those of the protective mini αA-crystallin chaperone MAC peptide. Mechanistic studies using bis-8-anilino-1-naphthalene sulfonic acid as a proxy drug showed that it bound to MAC sites, improved Tm of both H2O2 oxidized and native human gamma D, and suppressed turbidity of oxidized HγD, most likely by trapping exposed hydrophobic sites. The extent to which these drugs act as α-crystallin mimetics and reduce cataract progression remains to be demonstrated. This study provides initial insights into binding properties of C and G to γ-crystallins.


Asunto(s)
Materiales Biomiméticos , Catarata , Cristalino , Chaperonas Moleculares , Agregación Patológica de Proteínas , Salicilanilidas , Xantonas , alfa-Cristalinas , gamma-Cristalinas , Animales , Bovinos , Humanos , Ratones , alfa-Cristalinas/metabolismo , Catarata/tratamiento farmacológico , Catarata/prevención & control , Catarata/genética , gamma-Cristalinas/metabolismo , Peróxido de Hidrógeno/metabolismo , Cristalino/metabolismo , Chaperonas Moleculares/metabolismo , Simulación del Acoplamiento Molecular , Naftalenos/metabolismo , Ácidos Sulfónicos/metabolismo , Salicilanilidas/química , Salicilanilidas/farmacología , Salicilanilidas/uso terapéutico , Xantonas/química , Xantonas/farmacología , Xantonas/uso terapéutico , Agregación Patológica de Proteínas/tratamiento farmacológico , Materiales Biomiméticos/química , Materiales Biomiméticos/farmacología , Materiales Biomiméticos/uso terapéutico
7.
Cell Cycle ; 21(14): 1532-1542, 2022 07.
Artículo en Inglés | MEDLINE | ID: mdl-35343377

RESUMEN

As part of the development of an infectious bursal disease virus (IBDV) subunit vaccine, this study was designed to improve the expression of highly soluble VP2-LS3 (Haemophilus parasuis lumazine synthase 3, LS3) protein by using different tagged vectors in E. coli. IBDV VP2-LS3 gene was designed and synthesized. Fusion tags, GST, NusA, MBP, Ppi, γ-crystallin, ArsC, and Grifin were joined to the N-terminus of VP2-LS3 protein. Seven expression plasmids were constructed, and each plasmid was transformed into E. coli BL21 (DE3) competent cells. After induction by IPTG, the solubility and expression levels of the various VP2-LS3 proteins were analyzed by SDS-PAGE and Western Blot analysis. The fusion tag that significantly promoted soluble expression of the VP2-LS3 protein was selected. Recombinant proteins were purified using Ni-NTA affinity chromatography, then cleaved by using TEV protease and detected by using transmission electron microscopy. Gel electrophoresis and sequencing analysis showed that all seven recombinant vectors were successfully constructed. GST, NusA, MBP, Ppi, γ-crystallin, ArsC, and Grifin enhanced the expression and solubility of VP2 protein; however, MBP was more effective for the high-purity production of VP2-LS3. Western Blot analysis confirmed successful generation of VP2-LS3 fusion protein in E. coli. The result of transmission electron microscopy showed that VP2-LS3 formed nano-sized particles with homogeneous shape and relatively uniform size. This study established a method to generate VP2-LS3 recombinant protein, which may lay a foundation for the development and subsequent study of IBDV subunit vaccines.


Asunto(s)
Proteínas de Escherichia coli , Virus de la Enfermedad Infecciosa de la Bolsa , gamma-Cristalinas , Animales , Proteínas de la Cápside/genética , Proteínas de la Cápside/metabolismo , Escherichia coli/genética , Escherichia coli/metabolismo , Proteínas de Escherichia coli/metabolismo , Virus de la Enfermedad Infecciosa de la Bolsa/genética , Nanoestructuras , Proteínas Recombinantes/genética , Factores de Elongación Transcripcional/metabolismo , Proteínas Estructurales Virales/genética , gamma-Cristalinas/metabolismo
8.
PLoS One ; 16(10): e0258429, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34648536

RESUMEN

Static light scattering is a popular physical chemistry technique that enables calculation of physical attributes such as the radius of gyration and the second virial coefficient for a macromolecule (e.g., a polymer or a protein) in solution. The second virial coefficient is a physical quantity that characterizes the magnitude and sign of pairwise interactions between particles, and hence is related to aggregation propensity, a property of considerable scientific and practical interest. Estimating the second virial coefficient from experimental data is challenging due both to the degree of precision required and the complexity of the error structure involved. In contrast to conventional approaches based on heuristic ordinary least squares estimates, Bayesian inference for the second virial coefficient allows explicit modeling of error processes, incorporation of prior information, and the ability to directly test competing physical models. Here, we introduce a fully Bayesian model for static light scattering experiments on small-particle systems, with joint inference for concentration, index of refraction, oligomer size, and the second virial coefficient. We apply our proposed model to study the aggregation behavior of hen egg-white lysozyme and human γS-crystallin using in-house experimental data. Based on these observations, we also perform a simulation study on the primary drivers of uncertainty in this family of experiments, showing in particular the potential for improved monitoring and control of concentration to aid inference.


Asunto(s)
Dispersión Dinámica de Luz , Muramidasa/química , gamma-Cristalinas/química , Animales , Teorema de Bayes , Pollos , Humanos , Concentración de Iones de Hidrógeno , Modelos Moleculares , Muramidasa/metabolismo , Agregado de Proteínas , Cloruro de Sodio/química , gamma-Cristalinas/metabolismo
9.
Exp Eye Res ; 211: 108707, 2021 10.
Artículo en Inglés | MEDLINE | ID: mdl-34332989

RESUMEN

The nuclear region of the lens is metabolically quiescent, but it is far from inert chemically. Without cellular renewal and with decades of environmental exposures, the lens proteome, lipidome, and metabolome change. The lens crystallins have evolved exquisite mechanisms for resisting, slowing, adapting to, and perhaps even harnessing the effects of these cumulative chemical modifications to minimize the amount of light-scattering aggregation in the lens over a lifetime. Redox chemistry is a major factor in these damages and mitigating adaptations, and as such, it is likely to be a key component of any successful therapeutic strategy for preserving or rescuing lens transparency, and perhaps flexibility, during aging. Protein redox chemistry is typically mediated by Cys residues. This review will therefore focus primarily on the Cys-rich γ-crystallins of the human lens, taking care to extend these findings to the ß- and α-crystallins where pertinent.


Asunto(s)
Cisteína/metabolismo , Cristalino/metabolismo , gamma-Cristalinas/metabolismo , Envejecimiento/fisiología , Disulfuros/metabolismo , Glutatión/metabolismo , Disulfuro de Glutatión/metabolismo , Humanos , Oxidación-Reducción , Compuestos de Sulfhidrilo/metabolismo
10.
Exp Eye Res ; 206: 108535, 2021 05.
Artículo en Inglés | MEDLINE | ID: mdl-33705730

RESUMEN

The vertebrate lens is a valuable model system for investigating the gene expression changes that coordinate tissue differentiation due to its inclusion of two spatially separated cell types, the outer epithelial cells and the deeper denucleated fiber cells that they support. Zebrafish are a useful model system for studying lens development given the organ's rapid development in the first several days of life in an accessible, transparent embryo. While we have strong foundational knowledge of the diverse lens crystallin proteins and the basic gene regulatory networks controlling lens development, no study has detailed gene expression in a vertebrate lens at single cell resolution. Here we report an atlas of lens gene expression in zebrafish embryos and larvae at single cell resolution through five days of development, identifying a number of novel putative regulators of lens development. Our data address open questions about the temperospatial expression of α-crystallins during lens development that will support future studies of their function and provide the first detailed view of ß- and γ-crystallin expression in and outside the lens. We describe divergent expression in transcription factor genes that occur as paralog pairs in the zebrafish. Finally, we examine the expression dynamics of cytoskeletal, membrane associated, RNA-binding, and transcription factor genes, identifying a number of novel patterns. Overall these data provide a foundation for identifying and characterizing lens developmental regulatory mechanisms and revealing targets for future functional studies with potential therapeutic impact.


Asunto(s)
Células Epiteliales/metabolismo , Cristalino/metabolismo , Transcriptoma/genética , alfa-Cristalinas/genética , gamma-Cristalinas/genética , Animales , Células Epiteliales/citología , Cristalino/crecimiento & desarrollo , Pez Cebra , alfa-Cristalinas/metabolismo , gamma-Cristalinas/metabolismo
11.
Int J Biol Macromol ; 172: 475-482, 2021 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-33454329

RESUMEN

Despite of increasingly accumulated genetic variations of autosomal dominant congenital cataracts (ADCC), the causative genes of many ADCC patients remains unknown. In this research, we identified a novel F30S mutation in γS-crystallin from a three-generation Chinese family with ADCC. The patients possessing the F30S mutation exhibited nuclear cataract phenotype. The potential molecular mechanism underlying ADCC by the F30S mutation was investigated by comparing the structural features, stability and aggregatory potency of the mutated protein with the wild type protein. Spectroscopic experiments indicated that the F30S mutation did not affect γS-crystallin secondary structure compositions, but modified the microenvironments around aromatic side-chains. Thermal and chemical denaturation studies indicated that the mutation destabilized the protein and increased its aggregatory potency. The mutation altered the two-state unfolding of γS-crystallin to a three-state unfolding with the accumulation of an unfolding intermediate. The almost identical values in the changes of Gibbs free energies for transitions from the native state to intermediate and from the intermediate to unfolded state suggested that the mutation probably disrupted the cooperativity between the two domains during unfolding. Our results expand the genetic variation map of ADCC and provide novel insights into the molecular mechanism underlying ADCC caused by mutations in ß/γ-crystallins.


Asunto(s)
Catarata/congénito , Mutación , Estrés Fisiológico/genética , gamma-Cristalinas/química , Adolescente , Secuencia de Aminoácidos , Sustitución de Aminoácidos , Animales , Catarata/genética , Catarata/patología , Preescolar , Familia , Femenino , Humanos , Cinética , Masculino , Modelos Moleculares , Linaje , Agregado de Proteínas/genética , Conformación Proteica en Hélice alfa , Conformación Proteica en Lámina beta , Dominios y Motivos de Interacción de Proteínas , Estabilidad Proteica , Desplegamiento Proteico , Alineación de Secuencia , Homología de Secuencia de Aminoácido , Termodinámica , gamma-Cristalinas/genética , gamma-Cristalinas/metabolismo
12.
Biochem Biophys Res Commun ; 539: 70-76, 2021 02 05.
Artículo en Inglés | MEDLINE | ID: mdl-33422942

RESUMEN

Crystallin gene mutations are responsible for about half of the congenital cataract caused by genetic disorders. L45P and Y46D mutations of γC-crystallin have been reported in patients with nuclear congenital cataract. In this study, we explored the thermal stability of wild type (WT), L45P, and Y46D mutants of γC-crystallin at low and high concentrations, as well as the effect of αA-crystallin on the thermal stability of mutants. Spectroscopic experiments were used to monitor the structural changes on temperature-gradient and time-course heating process. Intermediate morphologies were determined through cryo-electron microscopy. The thermal stability of WT and mutants at concentrations ranging up to hundreds of milligrams were assessed via the UNcle multifunctional protein stability analysis system. The results showed that L45P and Y46D mutations impaired the thermal stability of γC-crystallin at low (0.2 mg/mL) and high concentrations (up to 200 mg/mL). Notably, with increase in protein concentration, the thermal stability of L45P and Y46D mutants of γC-crystallin simultaneously decreased. Thermal stability of L45P and Y46D mutants could be rescued by αA-crystallin in a concentration-dependent manner. The dramatic decrease in thermal stability of γC-crystallin caused by L45P and Y46D mutations contributed to congenital cataract in the mature human lens.


Asunto(s)
Catarata/genética , Mutación , gamma-Cristalinas/genética , Catarata/metabolismo , Catarata/patología , Microscopía por Crioelectrón/métodos , Humanos , Estabilidad Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo , Temperatura , gamma-Cristalinas/química , gamma-Cristalinas/metabolismo
13.
Structure ; 29(3): 284-291.e3, 2021 03 04.
Artículo en Inglés | MEDLINE | ID: mdl-33264606

RESUMEN

Cataracts involve the deposition of the crystallin proteins in the vertebrate eye lens, causing opacification and blindness. They are associated with either genetic mutation or protein damage that accumulates over the lifetime of the organism. Deamidation of Asn residues in several different crystallins has been observed and is frequently invoked as a cause of cataract. Here, we investigated the properties of Asp variants, deamidation products of γD-crystallin, by solution NMR, X-ray crystallography, and other biophysical techniques. No substantive structural or stability changes were noted for all seven Asn to Asp γD-crystallins. Importantly, no changes in diffusion interaction behavior could be detected. Our combined experimental results demonstrate that introduction of single Asp residues on the surface of γD-crystallin by deamidation is unlikely to be the driver of cataract formation in the eye lens.


Asunto(s)
Sustitución de Aminoácidos , Simulación de Dinámica Molecular , gamma-Cristalinas/química , Asparagina/química , Asparagina/genética , Desaminación , Humanos , Estabilidad Proteica , gamma-Cristalinas/genética , gamma-Cristalinas/metabolismo
14.
Int J Biol Macromol ; 169: 342-351, 2021 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-33347930

RESUMEN

γD-crystallin is among the most abundant γ-crystallins in the human eye lens which are essential for preserving its transparency. Aging, and environmental changes, cause crystallins to lose their native soluble structure and aggregate, resulting in the formation of cataract. Current treatment of cataract is surgical removal which is costly. Pharmaceutical therapeutics of cataract is an unmet need. We report a screen for small molecules capable of inhibiting aggregation of human γD-crystallin. Using a highly amyloidogenic hexapeptide model 41GCWMLY46 derived from the full-length protein, we screened a library of 68 anthraquinone molecules using ThT fluorescence assay. A leading hit, the cochineal Carmine, effectively reduced aggregation of the model GDC6 peptide in dose dependent manner. Similar effect was observed toward aggregation of the full-length γD-crystallin. Transmission electron microscopy, intrinsic Tryptophan fluorescence and ANS fluorescence assays corroborated these results. Insights obtained from molecular docking suggested that Carmine interaction with monomeric GDC6 involved hydrogen bonding with Ace group, Cys, Met residues and hydrophobic contact with Trp residue. Carmine was non-toxic toward retinal cells in culture. It also reduced ex vivo the turbidity of human extracted cataract material. Collectively, our results indicate that Carmine could be used for developing new therapeutics to treat cataract.


Asunto(s)
Amiloide/metabolismo , Carmín/farmacología , gamma-Cristalinas/metabolismo , Proteínas Amiloidogénicas/metabolismo , Carmín/metabolismo , Catarata/metabolismo , Línea Celular , Humanos , Cristalino/metabolismo , Modelos Moleculares , Simulación del Acoplamiento Molecular , Péptidos/metabolismo , Agregado de Proteínas/efectos de los fármacos , Epitelio Pigmentado de la Retina/efectos de los fármacos , Epitelio Pigmentado de la Retina/metabolismo , gamma-Cristalinas/química
15.
Phys Chem Chem Phys ; 23(1): 415-424, 2021 Jan 06.
Artículo en Inglés | MEDLINE | ID: mdl-33319872

RESUMEN

Proteins are the most abundant biomacromolecules in living cells, where they perform vital roles in virtually every biological process. To maintain their function, proteins need to remain in a stable (native) state. Inter- and intramolecular interactions in aqueous protein solutions govern the fate of proteins, as they can provoke their unfolding or association into aggregates. The initial steps of protein aggregation are difficult to capture experimentally, therefore we used molecular dynamics simulations in this study. We investigated the initial phase of aggregation of two different lysozymes, hen egg-white (HEWL) and T4 WT* lysozyme and also human lens γ-D crystallin by using atomistic simulations. We monitored the phase stability of their aqueous solutions by calculating time-dependent density fluctuations. We found that all proteins remained in their compact form despite aggregation. With an extensive analysis of intermolecular residue-residue interactions we discovered that arginine is of paramount importance in the initial stage of aggregation of HEWL and γ-D crystallin, meanwhile lysine was found to be the most involved amino acid in forming initial contacts between T4 WT* molecules.


Asunto(s)
Muramidasa/metabolismo , Multimerización de Proteína , gamma-Cristalinas/metabolismo , Secuencia de Aminoácidos , Animales , Arginina/química , Bacteriófago T4/química , Pollos , Humanos , Lisina/química , Simulación de Dinámica Molecular , Muramidasa/química , Unión Proteica , Temperatura , gamma-Cristalinas/química
16.
Biochem Biophys Res Commun ; 533(4): 913-918, 2020 12 17.
Artículo en Inglés | MEDLINE | ID: mdl-33004175

RESUMEN

αßγ-crystallins account for ∼90% of ocular proteins in lens with concentrations ≥400 mg/ml, which has to be soluble for the whole life-span and their aggregation results in cataract. So far, four cataract-causing mutants G18V, D26G, S39C and V42 M have been identified for human γS-crystallin. Mysteriously, lens maintains ATP concentrations of 3-7 mM despite being a metabolically-quiescent organ. Here by DSF and NMR, we characterized the binding of ATP to three cataract-causing mutants of human γS-crystallin as well as its effect on the solution conformations and thermal stability. The results together decode several novel findings: 1) ATP shows no detectable binding to WT and mutants, as well as no significant alternation of their conformations even at molar ratio of 1:200.2) Cataract-causing mutants show distinctive patterns of the crowding-induced destabilization. 3) ATP differentially antagonizes their crowding-induced destabilization. Our studies suggest that the crowding-induced destabilization of human γS-crystallin is also critically dependent of the hydration shell which could be differentially altered by four mutations. Most unexpectedly, ATP acts as an effective mediator for the protein hydration shell to antagonize the crowding-induced destabilization.


Asunto(s)
Adenosina Trifosfato/metabolismo , Catarata/genética , Catarata/metabolismo , gamma-Cristalinas/genética , gamma-Cristalinas/metabolismo , Sustitución de Aminoácidos , Rastreo Diferencial de Calorimetría , Humanos , Técnicas In Vitro , Modelos Moleculares , Proteínas Mutantes/química , Proteínas Mutantes/genética , Proteínas Mutantes/metabolismo , Mutación , Resonancia Magnética Nuclear Biomolecular , Unión Proteica , Dominios Proteicos , Estabilidad Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Solubilidad , Termodinámica , gamma-Cristalinas/química
17.
Int J Mol Sci ; 21(19)2020 Sep 24.
Artículo en Inglés | MEDLINE | ID: mdl-32987875

RESUMEN

Deamidation of asparagine (Asn) residues is a nonenzymatic post-translational modification of proteins. Asn deamidation is associated with pathogenesis of age-related diseases and hypofunction of monoclonal antibodies. Deamidation rate is known to be affected by the residue following Asn on the carboxyl side and by secondary structure. Information about main-chain conformation of Asn residues is necessary to accurately predict deamidation rate. In this study, the effect of main-chain conformation of Asn residues on deamidation rate was computationally investigated using molecular dynamics (MD) simulations and quantum chemical calculations. The results of MD simulations for γS-crystallin suggested that frequently deamidated Asn residues have common main-chain conformations on the N-terminal side. Based on the simulated structure, initial structures for the quantum chemical calculations were constructed and optimized geometries were obtained using the B3LYP density functional method. Structures that were frequently deamidated had a lower activation energy barrier than that of the little deamidated structure. We also showed that dihydrogen phosphate and bicarbonate ions are important catalysts for deamidation of Asn residues.


Asunto(s)
Asparagina/química , Procesamiento Proteico-Postraduccional , gamma-Cristalinas/química , Humanos , Simulación del Acoplamiento Molecular , Estructura Secundaria de Proteína , gamma-Cristalinas/metabolismo
18.
Int J Mol Sci ; 21(18)2020 Sep 05.
Artículo en Inglés | MEDLINE | ID: mdl-32899552

RESUMEN

ß/γ-Crystallins, the main structural protein in human lenses, have highly stable structure for keeping the lens transparent. Their mutations have been linked to cataracts. In this study, we identified 10 new mutations of ß/γ-crystallins in lens proteomic dataset of cataract patients using bioinformatics tools. Of these, two double mutants, S175G/H181Q of ßΒ2-crystallin and P24S/S31G of γD-crystallin, were found mutations occurred in the largest loop linking the distant ß-sheets in the Greek key motif. We selected these double mutants for identifying the properties of these mutations, employing biochemical assay, the identification of protein modifications with nanoUPLC-ESI-TOF tandem MS and examining their structural dynamics with hydrogen/deuterium exchange-mass spectrometry (HDX-MS). We found that both double mutations decrease protein stability and induce the aggregation of ß/γ-crystallin, possibly causing cataracts. This finding suggests that both the double mutants can serve as biomarkers of cataracts.


Asunto(s)
Catarata/genética , Cadena B de beta-Cristalina/genética , gamma-Cristalinas/genética , Adolescente , Adulto , Anciano , Preescolar , Humanos , Recién Nacido , Cristalino/metabolismo , Mutación/genética , Agregado de Proteínas/genética , Estabilidad Proteica , Proteómica/métodos , Cadena B de beta-Cristalina/metabolismo , gamma-Cristalinas/metabolismo
19.
Biochem Biophys Res Commun ; 530(3): 554-560, 2020 09 24.
Artículo en Inglés | MEDLINE | ID: mdl-32753316

RESUMEN

In lens, ∼90% of ocular proteins are αßγ-crystallins with concentrations ≥400 mg/ml, which need to remain soluble for the whole life-span and their aggregation leads to cataract. The G18V mutation of human γS-crystallin causes hereditary childhood-onset cortical cataract. Mysteriously, despite being a metabolically-quiescent organ, lens maintains ATP concentrations of 3-7 mM. Very recently, we found that ATP has no significant binding to γS-crystallin as well as no alternation of its conformation. Nevertheless, ATP antagonizes the crowding-induced destabilization of γS-crystallin even at 1:1, most likely by interacting with the hydration shell. Here by DSF and NMR, we characterized the effect of ATP on binding, conformation, stability of G18V γS-crystallin and its interactions with α-crystallin. The results reveal: 1) G18V significantly accelerates the crowding-induced destabilization with Tm of 67 °C reduced to 50.5 °C at 1 mM. 2) Most unexpectedly, G18V almost completely eliminates the antagonizing effect of ATP against the crowding-induced destabilization. 3) ATP shows no significant effect on the interactions of α-crystallin with both WT and G18V γS-crystallin. Results together decode for the first time that G18V causes cataract not only by accelerating the crowding-induced destabilization, but also by eliminating the antagonizing effect of ATP against the crowding-induced destabilization.


Asunto(s)
Adenosina Trifosfato/metabolismo , Catarata/genética , Mutación Puntual , gamma-Cristalinas/metabolismo , Catarata/metabolismo , Humanos , Modelos Moleculares , Unión Proteica , Conformación Proteica , Mapas de Interacción de Proteínas , Estabilidad Proteica , Termodinámica , alfa-Cristalinas/metabolismo , gamma-Cristalinas/química , gamma-Cristalinas/genética
20.
J Mol Biol ; 432(20): 5593-5613, 2020 09 18.
Artículo en Inglés | MEDLINE | ID: mdl-32827531

RESUMEN

One of the most crowded biological environments is the eye lens which contains a high concentration of crystallin proteins. The molecular chaperones αB-crystallin (αBc) with its lens partner αA-crystallin (αAc) prevent deleterious crystallin aggregation and cataract formation. However, some forms of cataract are associated with structural alteration and dysfunction of αBc. While many studies have investigated the structure and function of αBc under dilute in vitro conditions, the effect of crowding on these aspects is not well understood despite its in vivo relevance. The structure and chaperone ability of αBc under conditions that mimic the crowded lens environment were investigated using the polysaccharide Ficoll 400 and bovine γ-crystallin as crowding agents and a variety of biophysical methods, principally contrast variation small-angle neutron scattering. Under crowding conditions, αBc unfolds, increases its size/oligomeric state, decreases its thermal stability and chaperone ability, and forms kinetically distinct amorphous and fibrillar aggregates. However, the presence of αAc stabilizes αBc against aggregation. These observations provide a rationale, at the molecular level, for the aggregation of αBc in the crowded lens, a process that exhibits structural and functional similarities to the aggregation of cataract-associated αBc mutants R120G and D109A under dilute conditions. Strategies that maintain or restore αBc stability, as αAc does, may provide therapeutic avenues for the treatment of cataract.


Asunto(s)
Cristalino/metabolismo , Agregación Patológica de Proteínas/metabolismo , Cadena A de alfa-Cristalina/química , Cadena B de alfa-Cristalina/química , Cadena B de alfa-Cristalina/metabolismo , alfa-Cristalinas/metabolismo , Animales , Catarata/metabolismo , Bovinos , Chaperonas Moleculares/metabolismo , Conformación Proteica , Cadena A de alfa-Cristalina/metabolismo , gamma-Cristalinas/metabolismo
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